WEScover

WEScover

- 1 min

Summary

WEScover is a R/Shiny web application to highlight global breadth of coverage in gene level and inter-individual variation for genes along with corresponding genetic tests listed in the National Institutes of Health Genetic Testing Registry (GTR). WEScover helps to check whether genes of interest could be sufficiently covered in terms of breadth and depth by whole exome sequencing (WES). With the goal to minimize the change of false negative, for each transcript, breadth of coverage data was calculated at 10x, 20x, and 30x read depth from the 1000 Genomes Project (1KGP).

Results

The application is now running:

The manuscript describing the tool and its aims is currently in bioRxiv:

Carles Hernandez-Ferrer

Carles Hernandez-Ferrer

Bioinformatics, data analysis and software development

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